Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AC023310.3-201ENST00000557027 670 ntBASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AC100756.1-201ENST00000562736 682 ntBASIC13.77□□□□□ -0.21
HIST1H2ABP04908 RRP7BP-205ENST00000566851 833 ntBASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AC138749.3-201ENST00000567691 622 ntBASIC13.77□□□□□ -0.21
HIST1H2ABP04908 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AC116165.1-201ENST00000611806 668 ntBASIC13.77□□□□□ -0.21
HIST1H2ABP04908 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HIST1H2ABP04908 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 LINC00552-201ENST00000625151 2579 ntBASIC13.76□□□□□ -0.21
HIST1H2ABP04908 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 PMS2P2-201ENST00000425039 1128 ntBASIC13.76□□□□□ -0.21
HIST1H2ABP04908 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AC026410.3-201ENST00000514280 936 ntBASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AL390955.2-201ENST00000603032 514 ntBASIC13.76□□□□□ -0.21
HIST1H2ABP04908 AC107373.2-201ENST00000607735 490 ntBASIC13.76□□□□□ -0.21
HIST1H2ABP04908 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
HIST1H2ABP04908 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.75□□□□□ -0.21
HIST1H2ABP04908 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HIST1H2ABP04908 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms