Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 AC138969.2-201ENST00000532739 9932 ntBASIC15.39■□□□□ 0.05
MT-ND3P03897 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-ND3P03897 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.39■□□□□ 0.05
MT-ND3P03897 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.39■□□□□ 0.05
MT-ND3P03897 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-ND3P03897 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 AL391825.1-201ENST00000457671 1364 ntBASIC15.38■□□□□ 0.05
MT-ND3P03897 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND3P03897 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.38■□□□□ 0.05
MT-ND3P03897 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-ND3P03897 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 AC015802.1-201ENST00000588104 1449 ntBASIC15.38■□□□□ 0.05
MT-ND3P03897 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
MT-ND3P03897 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 AC104457.1-201ENST00000401024 814 ntBASIC15.38■□□□□ 0.05
MT-ND3P03897 AC087499.6-201ENST00000411576 835 ntBASIC15.38■□□□□ 0.05
MT-ND3P03897 AC135586.1-201ENST00000539323 574 ntBASIC15.38■□□□□ 0.05
MT-ND3P03897 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND3P03897 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-ND3P03897 BEND3P1-201ENST00000421591 1944 ntBASIC15.38■□□□□ 0.05
MT-ND3P03897 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND3P03897 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND3P03897 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND3P03897 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
MT-ND3P03897 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND3P03897 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-ND3P03897 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND3P03897 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-ND3P03897 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-ND3P03897 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-ND3P03897 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND3P03897 RN7SL692P-201ENST00000464677 288 ntBASIC15.37■□□□□ 0.05
MT-ND3P03897 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND3P03897 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-ND3P03897 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 AC008738.7-201ENST00000609744 511 ntBASIC15.37■□□□□ 0.05
MT-ND3P03897 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
MT-ND3P03897 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND3P03897 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND3P03897 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms