Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 INTS4P2-202ENST00000614726 2019 ntBASIC14.61□□□□□ -0.07
KRT6AP02538 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
KRT6AP02538 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT6AP02538 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 BX640514.1-201ENST00000583223 1918 ntBASIC14.61□□□□□ -0.07
KRT6AP02538 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT6AP02538 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT6AP02538 RNA5SP421-201ENST00000516864 134 ntBASIC14.61□□□□□ -0.07
KRT6AP02538 AC055876.2-201ENST00000531834 546 ntBASIC14.61□□□□□ -0.07
KRT6AP02538 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 AC007431.3-201ENST00000623221 587 ntBASIC14.61□□□□□ -0.07
KRT6AP02538 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT6AP02538 PRSS30P-206ENST00000641773 873 ntBASIC14.61□□□□□ -0.07
KRT6AP02538 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT6AP02538 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
KRT6AP02538 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
KRT6AP02538 AC087386.2-201ENST00000623212 4637 ntBASIC14.61□□□□□ -0.07
KRT6AP02538 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT6AP02538 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KRT6AP02538 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.6□□□□□ -0.07
KRT6AP02538 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
KRT6AP02538 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
KRT6AP02538 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
KRT6AP02538 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KRT6AP02538 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KRT6AP02538 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
KRT6AP02538 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
KRT6AP02538 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.6□□□□□ -0.07
KRT6AP02538 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.6□□□□□ -0.07
KRT6AP02538 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 AC120045.2-201ENST00000567334 178 ntBASIC14.6□□□□□ -0.07
KRT6AP02538 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.6□□□□□ -0.07
KRT6AP02538 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.6□□□□□ -0.07
KRT6AP02538 AC099568.2-201ENST00000609194 695 ntBASIC14.6□□□□□ -0.07
KRT6AP02538 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.6□□□□□ -0.07
KRT6AP02538 AC004790.1-201ENST00000612686 536 ntBASIC14.6□□□□□ -0.07
KRT6AP02538 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 AC139749.1-202ENST00000617529 3139 ntBASIC14.6□□□□□ -0.07
KRT6AP02538 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 AC023090.2-201ENST00000625182 2110 ntBASIC14.6□□□□□ -0.07
KRT6AP02538 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT6AP02538 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT6AP02538 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms