Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST1O76090 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.67■□□□□ 0.1
BEST1O76090 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST1O76090 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.67■□□□□ 0.1
BEST1O76090 AC104982.3-201ENST00000581995 514 ntBASIC15.67■□□□□ 0.1
BEST1O76090 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.67■□□□□ 0.1
BEST1O76090 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST1O76090 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BEST1O76090 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST1O76090 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST1O76090 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST1O76090 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 SHC1P1-201ENST00000425230 1745 ntBASIC15.66■□□□□ 0.1
BEST1O76090 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BEST1O76090 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
BEST1O76090 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST1O76090 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.66■□□□□ 0.1
BEST1O76090 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BEST1O76090 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.66■□□□□ 0.1
BEST1O76090 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.66■□□□□ 0.1
BEST1O76090 AC010141.1-201ENST00000411585 623 ntBASIC15.66■□□□□ 0.1
BEST1O76090 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.66■□□□□ 0.1
BEST1O76090 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.66■□□□□ 0.1
BEST1O76090 ZNF767P-206ENST00000513792 565 ntBASIC15.66■□□□□ 0.1
BEST1O76090 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.66■□□□□ 0.1
BEST1O76090 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.66■□□□□ 0.1
BEST1O76090 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.66■□□□□ 0.1
BEST1O76090 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.66■□□□□ 0.1
BEST1O76090 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.66■□□□□ 0.1
BEST1O76090 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.66■□□□□ 0.1
BEST1O76090 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BEST1O76090 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST1O76090 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
BEST1O76090 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 AC106881.1-201ENST00000605849 3329 ntBASIC15.65■□□□□ 0.1
BEST1O76090 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST1O76090 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BEST1O76090 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 AL354877.1-201ENST00000424412 413 ntBASIC15.65■□□□□ 0.1
BEST1O76090 AC104306.2-201ENST00000451877 341 ntBASIC15.65■□□□□ 0.1
BEST1O76090 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST1O76090 PFN1P12-201ENST00000455938 534 ntBASIC15.65■□□□□ 0.1
BEST1O76090 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.65■□□□□ 0.1
BEST1O76090 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 ALG3P1-201ENST00000508806 1114 ntBASIC15.65■□□□□ 0.1
BEST1O76090 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.65■□□□□ 0.1
BEST1O76090 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST1O76090 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.65■□□□□ 0.1
BEST1O76090 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST1O76090 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST1O76090 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST1O76090 AL118558.3-201ENST00000607414 1079 ntBASIC15.65■□□□□ 0.1
BEST1O76090 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST1O76090 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms