Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 AC104457.1-201ENST00000401024 814 ntBASIC11.79□□□□□ -0.52
ZNF253O75346 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
ZNF253O75346 TARDBPP1-201ENST00000442013 1203 ntBASIC11.79□□□□□ -0.52
ZNF253O75346 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.79□□□□□ -0.52
ZNF253O75346 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.79□□□□□ -0.52
ZNF253O75346 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.79□□□□□ -0.52
ZNF253O75346 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.79□□□□□ -0.52
ZNF253O75346 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
ZNF253O75346 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ZNF253O75346 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.79□□□□□ -0.52
ZNF253O75346 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.79□□□□□ -0.52
ZNF253O75346 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.79□□□□□ -0.52
ZNF253O75346 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZNF253O75346 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
ZNF253O75346 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
ZNF253O75346 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.78□□□□□ -0.52
ZNF253O75346 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
ZNF253O75346 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
ZNF253O75346 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ZNF253O75346 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ZNF253O75346 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.78□□□□□ -0.52
ZNF253O75346 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
ZNF253O75346 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
ZNF253O75346 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.78□□□□□ -0.52
ZNF253O75346 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ZNF253O75346 KRT18P32-201ENST00000424695 1287 ntBASIC11.78□□□□□ -0.52
ZNF253O75346 HTR5BP-201ENST00000430851 1154 ntBASIC11.78□□□□□ -0.52
ZNF253O75346 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.78□□□□□ -0.52
ZNF253O75346 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms