Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.51□□□□□ -0.09
CPNE3O75131 AC006453.4-201ENST00000636949 1252 ntBASIC14.51□□□□□ -0.09
CPNE3O75131 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.51□□□□□ -0.09
CPNE3O75131 AC148477.4-201ENST00000613430 1793 ntBASIC14.51□□□□□ -0.09
CPNE3O75131 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE3O75131 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE3O75131 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE3O75131 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE3O75131 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 AL158070.2-201ENST00000623713 1621 ntBASIC14.51□□□□□ -0.09
CPNE3O75131 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CPNE3O75131 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE3O75131 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE3O75131 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 AL137784.3-201ENST00000623858 2288 ntBASIC14.5□□□□□ -0.09
CPNE3O75131 KRT8P14-201ENST00000414254 1442 ntBASIC14.5□□□□□ -0.09
CPNE3O75131 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 GRK6P1-201ENST00000400595 1711 ntBASIC14.5□□□□□ -0.09
CPNE3O75131 AC023157.3-201ENST00000619086 2088 ntBASIC14.5□□□□□ -0.09
CPNE3O75131 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE3O75131 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.5□□□□□ -0.09
CPNE3O75131 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.5□□□□□ -0.09
CPNE3O75131 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.5□□□□□ -0.09
CPNE3O75131 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CPNE3O75131 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.5□□□□□ -0.09
CPNE3O75131 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.5□□□□□ -0.09
CPNE3O75131 SAMD11P1-201ENST00000571429 661 ntBASIC14.5□□□□□ -0.09
CPNE3O75131 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE3O75131 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CPNE3O75131 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.5□□□□□ -0.09
CPNE3O75131 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 AL354989.2-201ENST00000435838 1540 ntBASIC14.5□□□□□ -0.09
CPNE3O75131 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.5□□□□□ -0.09
CPNE3O75131 AC092127.1-201ENST00000567093 3455 ntBASIC14.5□□□□□ -0.09
CPNE3O75131 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.5□□□□□ -0.09
CPNE3O75131 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPNE3O75131 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE3O75131 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CPNE3O75131 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.49□□□□□ -0.09
CPNE3O75131 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CPNE3O75131 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.49□□□□□ -0.09
CPNE3O75131 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.49□□□□□ -0.09
CPNE3O75131 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CPNE3O75131 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.49□□□□□ -0.09
CPNE3O75131 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CPNE3O75131 Z93015.1-201ENST00000451718 390 ntBASIC14.49□□□□□ -0.09
CPNE3O75131 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPNE3O75131 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms