Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTN4O43707 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.84■□□□□ 0.29
ACTN4O43707 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTN4O43707 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACTN4O43707 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.84■□□□□ 0.29
ACTN4O43707 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTN4O43707 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTN4O43707 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ACTN4O43707 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTN4O43707 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTN4O43707 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ACTN4O43707 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ACTN4O43707 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ACTN4O43707 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ACTN4O43707 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.83■□□□□ 0.29
ACTN4O43707 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ACTN4O43707 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ACTN4O43707 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.83■□□□□ 0.29
ACTN4O43707 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.83■□□□□ 0.28
ACTN4O43707 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.83■□□□□ 0.28
ACTN4O43707 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.83■□□□□ 0.28
ACTN4O43707 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ACTN4O43707 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ACTN4O43707 FAM207CP-201ENST00000443486 507 ntBASIC16.83■□□□□ 0.28
ACTN4O43707 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ACTN4O43707 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.83■□□□□ 0.28
ACTN4O43707 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.83■□□□□ 0.28
ACTN4O43707 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.83■□□□□ 0.28
ACTN4O43707 RN7SL204P-201ENST00000582831 262 ntBASIC16.83■□□□□ 0.28
ACTN4O43707 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ACTN4O43707 LINC02560-201ENST00000596379 459 ntBASIC16.83■□□□□ 0.28
ACTN4O43707 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.83■□□□□ 0.28
ACTN4O43707 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ACTN4O43707 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.83■□□□□ 0.28
ACTN4O43707 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ACTN4O43707 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ACTN4O43707 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 OR2I1P-209ENST00000641730 5365 ntBASIC16.83■□□□□ 0.28
ACTN4O43707 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTN4O43707 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTN4O43707 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.82■□□□□ 0.28
ACTN4O43707 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ACTN4O43707 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTN4O43707 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 AC087499.6-201ENST00000411576 835 ntBASIC16.82■□□□□ 0.28
ACTN4O43707 BCRP1-201ENST00000444246 691 ntBASIC16.82■□□□□ 0.28
ACTN4O43707 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.82■□□□□ 0.28
ACTN4O43707 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 AC008494.3-201ENST00000606615 944 ntBASIC16.82■□□□□ 0.28
ACTN4O43707 AC004233.3-201ENST00000607794 1269 ntBASIC16.82■□□□□ 0.28
ACTN4O43707 WFDC1-204ENST00000613603 549 ntBASIC16.82■□□□□ 0.28
ACTN4O43707 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ACTN4O43707 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTN4O43707 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
ACTN4O43707 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTN4O43707 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms