Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SRRM5B3KS81 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM5B3KS81 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.58□□□□□ -0.39
SRRM5B3KS81 AC232323.1-201ENST00000540724 2099 ntBASIC12.58□□□□□ -0.39
SRRM5B3KS81 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SRRM5B3KS81 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 AL590640.2-201ENST00000457038 527 ntBASIC12.58□□□□□ -0.4
SRRM5B3KS81 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 AC131206.1-201ENST00000538078 1211 ntBASIC12.58□□□□□ -0.4
SRRM5B3KS81 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 AP000593.2-201ENST00000542775 1433 ntBASIC12.58□□□□□ -0.4
SRRM5B3KS81 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 AC106820.3-201ENST00000561653 397 ntBASIC12.58□□□□□ -0.4
SRRM5B3KS81 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 AC138951.2-201ENST00000623455 1161 ntBASIC12.58□□□□□ -0.4
SRRM5B3KS81 AC006453.4-201ENST00000636949 1252 ntBASIC12.58□□□□□ -0.4
SRRM5B3KS81 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 FKBP4P6-201ENST00000457486 1332 ntBASIC12.58□□□□□ -0.4
SRRM5B3KS81 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.58□□□□□ -0.4
SRRM5B3KS81 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SRRM5B3KS81 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 AC011840.2-201ENST00000563063 1520 ntBASIC12.57□□□□□ -0.4
SRRM5B3KS81 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 ANKRD19P-201ENST00000338192 862 ntBASIC12.57□□□□□ -0.4
SRRM5B3KS81 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SRRM5B3KS81 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.57□□□□□ -0.4
SRRM5B3KS81 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms