Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 EEF1DP1-201ENST00000585891 896 ntBASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.59■□□□□ 0.09
YJEFN3A6XGL0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
YJEFN3A6XGL0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
YJEFN3A6XGL0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
YJEFN3A6XGL0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
YJEFN3A6XGL0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
YJEFN3A6XGL0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
YJEFN3A6XGL0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
YJEFN3A6XGL0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
YJEFN3A6XGL0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 GOLGA2P4-201ENST00000441462 777 ntBASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 FAM86HP-204ENST00000513466 959 ntBASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 BX088702.1-201ENST00000610784 235 ntBASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 AC106881.1-201ENST00000605849 3329 ntBASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YJEFN3A6XGL0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 MIR1908-201ENST00000410394 80 ntBASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 Z93015.1-201ENST00000451718 390 ntBASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AC100850.1-201ENST00000506768 649 ntBASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 AP001002.3-201ENST00000623482 206 ntBASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms