Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 Z82170.1-201ENST00000625081 3192 ntBASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.95□□□□□ -0.34
MEIS3P1A6NDR6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 AL354702.1-201ENST00000442006 1960 ntBASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 AC019294.4-201ENST00000561777 2905 ntBASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 AL353705.2-201ENST00000428243 662 ntBASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 SLED1-202ENST00000512051 380 ntBASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 MIR497HG-202ENST00000572453 3838 ntBASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MEIS3P1A6NDR6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 AL157414.3-201ENST00000624276 1954 ntBASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms