Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AL132655.2-201ENST00000596276 594 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC093813.1-201ENST00000605066 256 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC093726.1-201ENST00000608064 963 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC073957.3-201ENST00000609998 6758 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 SLC7A15P-201ENST00000424028 1363 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 LILRP1-201ENST00000444199 1370 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AL157414.3-201ENST00000624276 1954 ntBASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AL158070.2-201ENST00000623713 1621 ntBASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 C1QBPP1-201ENST00000400117 770 ntBASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 WDR53-203ENST00000429115 683 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AC026410.3-201ENST00000514280 936 ntBASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AC123567.1-201ENST00000548294 1261 ntBASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC10.96□□□□□ -0.65
TRGV1A0A0A0MS02 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRGV1A0A0A0MS02 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms