Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
HLA-DRB4X5D2U9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
HLA-DRB4X5D2U9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC134915.1-201ENST00000426461 574 ntBASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC002472.2-201ENST00000442739 958 ntBASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC123567.1-201ENST00000548294 1261 ntBASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 MIR4745-201ENST00000577608 62 ntBASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 RN7SL204P-201ENST00000582831 262 ntBASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AC010327.5-201ENST00000586923 3061 ntBASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AL662799.1-202ENST00000614205 422 ntBASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.39□□□□□ -0.59
HLA-DRB4X5D2U9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AJ011931.1-201ENST00000618749 2492 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AC107918.4-201ENST00000641966 3141 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AL359881.3-201ENST00000602640 1721 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms