Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 MTND2P7-201ENST00000521337 640 ntBASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 AC133539.2-201ENST00000604757 467 ntBASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 AL096865.1-201ENST00000606796 927 ntBASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 CR383656.2-201ENST00000548656 2254 ntBASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 KRT8P22-201ENST00000562317 1415 ntBASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 AC018442.1-201ENST00000421439 2061 ntBASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHGA11Q9Y5H2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AC027601.5-201ENST00000624065 2482 ntBASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 AL137783.1-201ENST00000623494 1896 ntBASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDHGA11Q9Y5H2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHGA11Q9Y5H2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms