Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ACTG1P3-201ENST00000431775 1114 ntBASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 AC093433.1-201ENST00000458048 571 ntBASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 RN7SL692P-201ENST00000464677 288 ntBASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 KRT18P25-201ENST00000508931 1278 ntBASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 AL596325.1-201ENST00000563991 1082 ntBASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 AP000484.1-201ENST00000620067 1252 ntBASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB13Q9Y5F0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AC022137.2-201ENST00000503482 481 ntBASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AC022616.1-201ENST00000518688 554 ntBASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AP005018.1-201ENST00000525475 301 ntBASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 AL021368.1-201ENST00000607490 540 ntBASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB13Q9Y5F0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 AC106881.1-201ENST00000605849 3329 ntBASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHB13Q9Y5F0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDHB13Q9Y5F0 SFR1P2-201ENST00000421841 730 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms