Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL157407.1-201ENST00000435784 904 ntBASIC15.55■□□□□ 0.08
YIPF1Q9Y548 AL645933.1-201ENST00000440087 609 ntBASIC15.55■□□□□ 0.08
YIPF1Q9Y548 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.55■□□□□ 0.08
YIPF1Q9Y548 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 NAP1L6-202ENST00000641404 1222 ntBASIC15.55■□□□□ 0.08
YIPF1Q9Y548 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF1Q9Y548 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 AC136759.1-202ENST00000530858 2194 ntBASIC15.54■□□□□ 0.08
YIPF1Q9Y548 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 AL035414.1-201ENST00000451327 857 ntBASIC15.54■□□□□ 0.08
YIPF1Q9Y548 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 AC090857.1-201ENST00000527400 390 ntBASIC15.54■□□□□ 0.08
YIPF1Q9Y548 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 CICP6-201ENST00000457191 2729 ntBASIC15.54■□□□□ 0.08
YIPF1Q9Y548 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF1Q9Y548 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 AL109954.1-202ENST00000564051 2148 ntBASIC15.53■□□□□ 0.08
YIPF1Q9Y548 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.53■□□□□ 0.08
YIPF1Q9Y548 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 LINC01101-201ENST00000622953 1884 ntBASIC15.53■□□□□ 0.08
YIPF1Q9Y548 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.53■□□□□ 0.08
YIPF1Q9Y548 AC078875.1-201ENST00000431907 724 ntBASIC15.53■□□□□ 0.08
YIPF1Q9Y548 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 AC006122.1-201ENST00000493323 440 ntBASIC15.53■□□□□ 0.08
YIPF1Q9Y548 AC134698.3-201ENST00000523880 214 ntBASIC15.53■□□□□ 0.08
YIPF1Q9Y548 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 AF254983.2-201ENST00000612331 135 ntBASIC15.53■□□□□ 0.08
YIPF1Q9Y548 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms