Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UBE2D4Q9Y2X8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 MIR940-201ENST00000401276 94 ntBASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 AC004461.1-201ENST00000412461 403 ntBASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 SPDYE7P-202ENST00000420373 878 ntBASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBE2D4Q9Y2X8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 INE2-201ENST00000630399 1874 ntBASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D4Q9Y2X8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms