Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 CFTRP3-201ENST00000376400 212 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AL353637.1-201ENST00000451571 732 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 FAM92A-204ENST00000517718 827 ntTSL 3 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 OR4A46P-201ENST00000527255 933 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 DNM1P51-201ENST00000558149 522 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 ECM1P1-201ENST00000604092 1279 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AL512324.3-201ENST00000619383 882 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AC104820.1-201ENST00000624183 307 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AC006453.1-201ENST00000636037 1257 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AC026691.1-201ENST00000602502 2017 ntBASIC14.44□□□□□ -0.1
LHX6Q9UPM6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LHX6Q9UPM6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 MED20-203ENST00000409060 815 ntTSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 OR4A19P-201ENST00000533579 1103 ntBASIC14.43□□□□□ -0.1
LHX6Q9UPM6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 AL805961.1-203ENST00000641078 1258 ntBASIC14.43□□□□□ -0.1
LHX6Q9UPM6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.43□□□□□ -0.1
LHX6Q9UPM6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LHX6Q9UPM6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms