Protein–RNA interactions for Protein: Q9NXP7

GIN1, Gypsy retrotransposon integrase-like protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1Q9NXP7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 CYMP-203ENST00000474680 1263 ntBASIC14.37□□□□□ -0.11
GIN1Q9NXP7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.37□□□□□ -0.11
GIN1Q9NXP7 AC012508.2-201ENST00000567613 1472 ntBASIC14.37□□□□□ -0.11
GIN1Q9NXP7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GIN1Q9NXP7 LINC01230-201ENST00000625222 3017 ntBASIC14.36□□□□□ -0.11
GIN1Q9NXP7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 GAPDHP40-201ENST00000505218 1006 ntBASIC14.36□□□□□ -0.11
GIN1Q9NXP7 RNA5SP421-201ENST00000516864 134 ntBASIC14.36□□□□□ -0.11
GIN1Q9NXP7 AC104794.3-201ENST00000566840 1248 ntBASIC14.36□□□□□ -0.11
GIN1Q9NXP7 RRP7BP-205ENST00000566851 833 ntBASIC14.36□□□□□ -0.11
GIN1Q9NXP7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 AP000845.1-201ENST00000581677 2131 ntBASIC14.36□□□□□ -0.11
GIN1Q9NXP7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GIN1Q9NXP7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 ACE3P-201ENST00000423435 1973 ntBASIC14.35□□□□□ -0.11
GIN1Q9NXP7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GIN1Q9NXP7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms