Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 MRPS18AP1-201ENST00000414458 589 ntBASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 AC074338.1-201ENST00000416825 156 ntBASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LIN7CQ9NUP9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 TSPY16P-201ENST00000449843 468 ntBASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 AC092337.1-201ENST00000568699 1129 ntBASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 AC004461.2-201ENST00000629517 803 ntBASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 AC117489.1-201ENST00000625169 3217 ntBASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 LILRP1-201ENST00000444199 1370 ntBASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LIN7CQ9NUP9 AC006504.5-208ENST00000588784 2401 ntBASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms