Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AL354877.1-201ENST00000424412 413 ntBASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AC026434.2-201ENST00000506094 1078 ntBASIC15.56■□□□□ 0.08
HPS4Q9NQG7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AC105129.2-201ENST00000559536 390 ntBASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.56■□□□□ 0.08
HPS4Q9NQG7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 AL157414.3-201ENST00000624276 1954 ntBASIC15.55■□□□□ 0.08
HPS4Q9NQG7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 AL662890.1-201ENST00000396818 632 ntBASIC15.55■□□□□ 0.08
HPS4Q9NQG7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.55■□□□□ 0.08
HPS4Q9NQG7 EIF4HP1-201ENST00000453115 687 ntBASIC15.55■□□□□ 0.08
HPS4Q9NQG7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 CHMP4BP1-201ENST00000556017 588 ntBASIC15.55■□□□□ 0.08
HPS4Q9NQG7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HPS4Q9NQG7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.54■□□□□ 0.08
HPS4Q9NQG7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS4Q9NQG7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms