Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 BX322534.1-201ENST00000635574 241 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AC215524.1-201ENST00000635696 241 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 CES1P2-201ENST00000566467 1242 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 AC005274.1-201ENST00000623460 802 ntBASIC13.57□□□□□ -0.24
CHD8Q9HCK8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.57□□□□□ -0.24
CHD8Q9HCK8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.56□□□□□ -0.24
CHD8Q9HCK8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 FAM86JP-202ENST00000484500 988 ntBASIC13.56□□□□□ -0.24
CHD8Q9HCK8 ALG1L7P-201ENST00000502317 768 ntBASIC13.56□□□□□ -0.24
CHD8Q9HCK8 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AL590556.2-202ENST00000636906 844 ntBASIC13.56□□□□□ -0.24
CHD8Q9HCK8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AC093106.1-201ENST00000437271 352 ntBASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AC112694.1-202ENST00000540985 943 ntBASIC13.56□□□□□ -0.24
CHD8Q9HCK8 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 ANKRD26P1-203ENST00000569528 966 ntBASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AC016582.2-202ENST00000587765 1094 ntBASIC13.56□□□□□ -0.24
CHD8Q9HCK8 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHD8Q9HCK8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AL080243.1-201ENST00000423293 1060 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms