Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BRF2Q9HAW0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 TERF1P3-201ENST00000505638 1227 ntBASIC14.36□□□□□ -0.11
BRF2Q9HAW0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 MIR4745-201ENST00000577608 62 ntBASIC14.36□□□□□ -0.11
BRF2Q9HAW0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BRF2Q9HAW0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 WASH4P-201ENST00000564273 1246 ntBASIC14.35□□□□□ -0.11
BRF2Q9HAW0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 HSPA7-201ENST00000445535 1927 ntBASIC14.35□□□□□ -0.11
BRF2Q9HAW0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BRF2Q9HAW0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 ACTG1P3-201ENST00000431775 1114 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms