Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 DGCR5-201ENST00000399539 862 ntBASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 AC236430.1-201ENST00000402231 743 ntBASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 AC002472.2-201ENST00000442739 958 ntBASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 GCOM2-201ENST00000509133 1104 ntBASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 ENPP7P5-201ENST00000541031 1031 ntBASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 AL603764.1-201ENST00000636452 321 ntBASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RSPO3Q9BXY4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 AL138709.1-201ENST00000614840 1693 ntBASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 TLE1P1-201ENST00000422965 589 ntBASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 AL391280.1-201ENST00000506969 1062 ntBASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 SPCS2P1-201ENST00000561636 679 ntBASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 AC103988.2-201ENST00000561804 725 ntBASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 AP001063.1-201ENST00000568332 529 ntBASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 AC138696.2-201ENST00000607376 223 ntBASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO3Q9BXY4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms