Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPAP1Q9BWH6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 FAM8A4P-201ENST00000435433 1213 ntBASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 HIST2H2BC-201ENST00000498492 580 ntBASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 RN7SL713P-201ENST00000582127 302 ntBASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 AC073413.1-201ENST00000603927 732 ntBASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPAP1Q9BWH6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
RPAP1Q9BWH6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RPAP1Q9BWH6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 AC092506.1-202ENST00000401022 528 ntBASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 AC126915.1-201ENST00000522847 1038 ntBASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 ZACNP1-201ENST00000612259 710 ntBASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 AC244157.2-201ENST00000616239 1006 ntBASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RPAP1Q9BWH6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPAP1Q9BWH6 COX5BP1-201ENST00000507622 393 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms