Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.03□□□□□ -0.64
MUC4Q99102 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.03□□□□□ -0.64
MUC4Q99102 AC106886.1-201ENST00000568660 600 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.03□□□□□ -0.64
MUC4Q99102 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.03□□□□□ -0.64
MUC4Q99102 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.03□□□□□ -0.64
MUC4Q99102 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 DRD5P1-201ENST00000456605 1438 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.02□□□□□ -0.64
MUC4Q99102 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.02□□□□□ -0.64
MUC4Q99102 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
MUC4Q99102 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MUC4Q99102 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.02□□□□□ -0.64
MUC4Q99102 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
MUC4Q99102 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.02□□□□□ -0.64
MUC4Q99102 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.02□□□□□ -0.64
MUC4Q99102 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
MUC4Q99102 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
MUC4Q99102 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
MUC4Q99102 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.02□□□□□ -0.65
MUC4Q99102 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.02□□□□□ -0.65
MUC4Q99102 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.02□□□□□ -0.65
MUC4Q99102 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
MUC4Q99102 HLA-K-203ENST00000430151 1046 ntBASIC11.02□□□□□ -0.65
MUC4Q99102 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.02□□□□□ -0.65
MUC4Q99102 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
MUC4Q99102 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.02□□□□□ -0.65
MUC4Q99102 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.02□□□□□ -0.65
MUC4Q99102 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 AC107373.2-201ENST00000607735 490 ntBASIC11.02□□□□□ -0.65
MUC4Q99102 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.02□□□□□ -0.65
MUC4Q99102 GPR182-203ENST00000622922 591 ntBASIC11.02□□□□□ -0.65
MUC4Q99102 AL158212.4-201ENST00000624062 1286 ntBASIC11.02□□□□□ -0.65
MUC4Q99102 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
MUC4Q99102 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
MUC4Q99102 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.02□□□□□ -0.65
MUC4Q99102 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
MUC4Q99102 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.02□□□□□ -0.65
MUC4Q99102 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
MUC4Q99102 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.02□□□□□ -0.65
MUC4Q99102 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.02□□□□□ -0.65
MUC4Q99102 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MUC4Q99102 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 AL589987.1-201ENST00000453380 819 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms