Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AC009884.2-201ENST00000603110 324 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 CASP2-203ENST00000392925 616 ntTSL 3 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AC092570.1-201ENST00000414446 469 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 DUTP3-201ENST00000450025 415 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AC084364.1-201ENST00000551967 1556 ntBASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD1Q96PZ7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 GEMIN8P4-201ENST00000380526 729 ntBASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 RN7SL81P-201ENST00000493781 261 ntBASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 AL603764.1-201ENST00000636452 321 ntBASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 LINC02228-204ENST00000642115 2962 ntBASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 AC007326.1-201ENST00000604539 458 ntBASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 PPT1-215ENST00000641471 2368 ntBASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 AC073347.1-201ENST00000421633 2643 ntBASIC12.47□□□□□ -0.41
CSMD1Q96PZ7 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 RPSAP15-201ENST00000448168 861 ntBASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 CYP4F36P-201ENST00000589193 186 ntBASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 SSR4P1-203ENST00000599569 2260 ntBASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms