Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 HIST2H2BB-201ENST00000449108 381 ntBASIC20.02■□□□□ 0.8
CFAP53Q96M91 FAM86HP-204ENST00000513466 959 ntBASIC20.02■□□□□ 0.8
CFAP53Q96M91 AC131206.1-201ENST00000538078 1211 ntBASIC20.02■□□□□ 0.8
CFAP53Q96M91 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 AC244157.2-201ENST00000616239 1006 ntBASIC20.02■□□□□ 0.8
CFAP53Q96M91 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC20.02■□□□□ 0.8
CFAP53Q96M91 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CFAP53Q96M91 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.02■□□□□ 0.79
CFAP53Q96M91 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.02■□□□□ 0.79
CFAP53Q96M91 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.02■□□□□ 0.79
CFAP53Q96M91 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CFAP53Q96M91 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 BRWD1P1-201ENST00000401091 371 ntBASIC20.01■□□□□ 0.79
CFAP53Q96M91 MTX1P1-201ENST00000440904 838 ntBASIC20.01■□□□□ 0.79
CFAP53Q96M91 GCOM2-201ENST00000509133 1104 ntBASIC20.01■□□□□ 0.79
CFAP53Q96M91 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 CICP23-201ENST00000605013 2741 ntBASIC20.01■□□□□ 0.79
CFAP53Q96M91 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CFAP53Q96M91 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CFAP53Q96M91 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CFAP53Q96M91 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20■□□□□ 0.79
CFAP53Q96M91 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC20■□□□□ 0.79
CFAP53Q96M91 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 AC018442.1-201ENST00000421439 2061 ntBASIC20■□□□□ 0.79
CFAP53Q96M91 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20■□□□□ 0.79
CFAP53Q96M91 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CFAP53Q96M91 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20■□□□□ 0.79
CFAP53Q96M91 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CFAP53Q96M91 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CFAP53Q96M91 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20■□□□□ 0.79
CFAP53Q96M91 AL358472.3-201ENST00000608147 415 ntBASIC20■□□□□ 0.79
CFAP53Q96M91 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20■□□□□ 0.79
CFAP53Q96M91 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC20■□□□□ 0.79
CFAP53Q96M91 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC20■□□□□ 0.79
CFAP53Q96M91 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP53Q96M91 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP53Q96M91 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP53Q96M91 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
CFAP53Q96M91 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP53Q96M91 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms