Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.16■□□□□ 0.18
SNX27Q96L92 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SNX27Q96L92 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNX27Q96L92 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.16■□□□□ 0.18
SNX27Q96L92 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SNX27Q96L92 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.15■□□□□ 0.18
SNX27Q96L92 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.15■□□□□ 0.18
SNX27Q96L92 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.15■□□□□ 0.18
SNX27Q96L92 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 RPL13AP19-201ENST00000434320 584 ntBASIC16.15■□□□□ 0.18
SNX27Q96L92 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.15■□□□□ 0.18
SNX27Q96L92 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.15■□□□□ 0.18
SNX27Q96L92 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.15■□□□□ 0.18
SNX27Q96L92 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 LINC00528-201ENST00000600723 2160 ntBASIC16.15■□□□□ 0.18
SNX27Q96L92 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.15■□□□□ 0.18
SNX27Q96L92 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 AL022328.3-201ENST00000607943 679 ntBASIC16.15■□□□□ 0.18
SNX27Q96L92 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.15■□□□□ 0.18
SNX27Q96L92 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.15■□□□□ 0.18
SNX27Q96L92 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.15■□□□□ 0.18
SNX27Q96L92 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNX27Q96L92 AC104640.1-201ENST00000562617 2109 ntBASIC16.15■□□□□ 0.18
SNX27Q96L92 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.15■□□□□ 0.18
SNX27Q96L92 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SNX27Q96L92 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SNX27Q96L92 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
SNX27Q96L92 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SNX27Q96L92 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SNX27Q96L92 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.14■□□□□ 0.17
SNX27Q96L92 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.14■□□□□ 0.17
SNX27Q96L92 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.14■□□□□ 0.17
SNX27Q96L92 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.14■□□□□ 0.17
SNX27Q96L92 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SNX27Q96L92 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.14■□□□□ 0.17
SNX27Q96L92 POM121L10P-201ENST00000436994 1285 ntBASIC16.14■□□□□ 0.17
SNX27Q96L92 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.14■□□□□ 0.17
SNX27Q96L92 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.14■□□□□ 0.17
SNX27Q96L92 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.14■□□□□ 0.17
SNX27Q96L92 AC131206.1-201ENST00000538078 1211 ntBASIC16.14■□□□□ 0.17
SNX27Q96L92 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.14■□□□□ 0.17
SNX27Q96L92 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.14■□□□□ 0.17
SNX27Q96L92 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.14■□□□□ 0.17
SNX27Q96L92 AC005730.2-201ENST00000564549 1184 ntBASIC16.14■□□□□ 0.17
SNX27Q96L92 MIR4783-201ENST00000580343 82 ntBASIC16.14■□□□□ 0.17
SNX27Q96L92 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.14■□□□□ 0.17
SNX27Q96L92 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNX27Q96L92 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.14■□□□□ 0.17
SNX27Q96L92 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SNX27Q96L92 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms