Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 MIR6074-201ENST00000612054 107 ntBASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 MYADML-201ENST00000474610 2147 ntBASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AL136172.1-201ENST00000598590 1394 ntBASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AC005229.1-201ENST00000392885 409 ntBASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 HMGN1P19-201ENST00000436976 333 ntBASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AP001889.1-201ENST00000525414 633 ntBASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AP000593.2-201ENST00000542775 1433 ntBASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AP001002.3-201ENST00000623482 206 ntBASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AC025048.6-201ENST00000634326 1161 ntBASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM5Q96HC4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AC152010.1-201ENST00000415779 2006 ntBASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms