Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 AC104073.2-201ENST00000453737 312 ntBASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 AL391280.1-201ENST00000506969 1062 ntBASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 MARK2P5-201ENST00000507649 634 ntBASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 AC116345.2-201ENST00000512837 523 ntBASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 AC009084.3-201ENST00000623356 437 ntBASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
U2AF1L4Q8WU68 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 AL513477.1-201ENST00000602865 2407 ntBASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 RTN3P1-201ENST00000536295 711 ntBASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 AP001065.2-201ENST00000617205 644 ntBASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 AL805961.1-201ENST00000642026 753 ntBASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
U2AF1L4Q8WU68 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 AL139094.1-201ENST00000405549 1188 ntBASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 PDIA3P2-201ENST00000428073 158 ntBASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.16■□□□□ 0.34
U2AF1L4Q8WU68 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms