Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC018529.2-202ENST00000611482 3087 ntBASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 BX539320.1-201ENST00000623759 877 ntBASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SIMC1Q8NDZ2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 LILRP1-201ENST00000444199 1370 ntBASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 RN7SL692P-201ENST00000464677 288 ntBASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms