Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AL645937.2-201ENST00000396808 931 ntBASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AC234782.1-201ENST00000451950 919 ntBASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AC012618.1-201ENST00000461223 412 ntBASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 IQSEC3P1-201ENST00000538799 536 ntBASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AC013355.1-201ENST00000562625 723 ntBASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF248Q8NDW4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 KRT8P4-201ENST00000509735 1454 ntBASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 DPM3-202ENST00000368399 517 ntBASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AL139094.1-201ENST00000405549 1188 ntBASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AC069218.1-201ENST00000435269 762 ntBASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AC006335.1-201ENST00000445200 547 ntBASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AC104784.1-201ENST00000473096 294 ntBASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 AL805961.1-203ENST00000641078 1258 ntBASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF248Q8NDW4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms