Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MIR3180-2-201ENST00000581748 88 ntBASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC22.84■■□□□ 1.25
CFAP43Q8NDM7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CFAP43Q8NDM7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 GCSHP3-201ENST00000431120 391 ntBASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 AC007326.1-201ENST00000604539 458 ntBASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
CFAP43Q8NDM7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 PAUPAR-201ENST00000630360 2965 ntBASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 DBP-202ENST00000593500 712 ntTSL 2 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 AC009560.1-201ENST00000620208 434 ntBASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 AC018442.1-201ENST00000421439 2061 ntBASIC22.82■■□□□ 1.24
CFAP43Q8NDM7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AREG-202ENST00000502307 956 ntTSL 5 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 PLS3-210ENST00000626746 216 ntTSL 4 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 BAK1P1-201ENST00000317045 636 ntBASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AL035414.1-201ENST00000451327 857 ntBASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC22.81■■□□□ 1.24
CFAP43Q8NDM7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms