Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AC093004.1-201ENST00000508850 424 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AC104596.2-201ENST00000512793 793 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 RNA5SP421-201ENST00000516864 134 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AP001582.1-201ENST00000525856 295 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AC055876.2-201ENST00000531834 546 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AC120045.2-201ENST00000567334 178 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 SPDYE22P-201ENST00000582158 798 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 BRI3BPP1-201ENST00000594224 787 ntBASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00346Q8IVM7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 SLC7A15P-201ENST00000424028 1363 ntBASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 C1QBPP1-201ENST00000400117 770 ntBASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 SERBP1P5-201ENST00000510079 1181 ntBASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 RRP7BP-205ENST00000566851 833 ntBASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 AC093813.1-201ENST00000605066 256 ntBASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 BX539320.1-201ENST00000623759 877 ntBASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00346Q8IVM7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 C8orf49-201ENST00000525043 1968 ntBASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00346Q8IVM7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms