Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 AC093004.1-201ENST00000508850 424 ntBASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 AC055876.2-201ENST00000531834 546 ntBASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 MIR6074-201ENST00000612054 107 ntBASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDKAL1Q5VV42 AL136172.1-201ENST00000598590 1394 ntBASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 RN7SKP230-201ENST00000365642 335 ntBASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 AC092552.1-201ENST00000547243 906 ntBASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 AC005252.2-201ENST00000624630 1141 ntBASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 AC008761.3-201ENST00000624803 892 ntBASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 MRPL37P1-201ENST00000592451 1337 ntBASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDKAL1Q5VV42 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 AC011498.7-201ENST00000624986 2027 ntBASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 ACTBP8-201ENST00000403258 1108 ntBASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 AC098850.1-201ENST00000419919 790 ntBASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 AL512638.1-201ENST00000457493 794 ntBASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 KRT8P35-201ENST00000483942 1338 ntBASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDKAL1Q5VV42 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms