Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX3P78415 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX3P78415 HINT2P1-201ENST00000419438 481 ntBASIC17.54■□□□□ 0.4
IRX3P78415 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 AC106794.1-201ENST00000506935 792 ntBASIC17.54■□□□□ 0.4
IRX3P78415 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.54■□□□□ 0.4
IRX3P78415 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
IRX3P78415 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 AC092127.1-201ENST00000567093 3455 ntBASIC17.54■□□□□ 0.4
IRX3P78415 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX3P78415 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
IRX3P78415 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX3P78415 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.54■□□□□ 0.4
IRX3P78415 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.54■□□□□ 0.4
IRX3P78415 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
IRX3P78415 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.54■□□□□ 0.4
IRX3P78415 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IRX3P78415 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX3P78415 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
IRX3P78415 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.53■□□□□ 0.4
IRX3P78415 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.53■□□□□ 0.4
IRX3P78415 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
IRX3P78415 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
IRX3P78415 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
IRX3P78415 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX3P78415 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX3P78415 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 AC011742.3-201ENST00000439053 820 ntBASIC17.53■□□□□ 0.4
IRX3P78415 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.53■□□□□ 0.4
IRX3P78415 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX3P78415 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.53■□□□□ 0.4
IRX3P78415 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.53■□□□□ 0.4
IRX3P78415 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
IRX3P78415 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
IRX3P78415 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.53■□□□□ 0.4
IRX3P78415 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
IRX3P78415 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.53■□□□□ 0.4
IRX3P78415 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX3P78415 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
IRX3P78415 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
IRX3P78415 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IRX3P78415 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IRX3P78415 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 TUBBP5-203ENST00000508529 1334 ntBASIC17.52■□□□□ 0.4
IRX3P78415 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IRX3P78415 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IRX3P78415 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IRX3P78415 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.52■□□□□ 0.4
IRX3P78415 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX3P78415 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
IRX3P78415 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.52■□□□□ 0.4
IRX3P78415 GHSR-202ENST00000427970 912 ntBASIC17.52■□□□□ 0.4
IRX3P78415 HLA-K-203ENST00000430151 1046 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms