Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SEC61A1P61619 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 KRT8P37-201ENST00000451609 1420 ntBASIC13.27□□□□□ -0.29
SEC61A1P61619 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SEC61A1P61619 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 AC007541.1-201ENST00000570282 1469 ntBASIC13.27□□□□□ -0.29
SEC61A1P61619 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.27□□□□□ -0.29
SEC61A1P61619 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AC092135.3-201ENST00000624151 1846 ntBASIC13.27□□□□□ -0.29
SEC61A1P61619 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.27□□□□□ -0.29
SEC61A1P61619 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
SEC61A1P61619 AL356585.2-201ENST00000625078 2396 ntBASIC13.27□□□□□ -0.29
SEC61A1P61619 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
SEC61A1P61619 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61A1P61619 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SEC61A1P61619 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.26□□□□□ -0.29
SEC61A1P61619 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.26□□□□□ -0.29
SEC61A1P61619 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 AC138969.2-201ENST00000532739 9932 ntBASIC13.26□□□□□ -0.29
SEC61A1P61619 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SEC61A1P61619 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.26□□□□□ -0.29
SEC61A1P61619 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.26□□□□□ -0.29
SEC61A1P61619 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 AC127383.1-201ENST00000444697 1800 ntBASIC13.26□□□□□ -0.29
SEC61A1P61619 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.26□□□□□ -0.29
SEC61A1P61619 DOC2GP-202ENST00000514950 1163 ntBASIC13.26□□□□□ -0.29
SEC61A1P61619 SDHAP3-202ENST00000515467 728 ntBASIC13.26□□□□□ -0.29
SEC61A1P61619 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SEC61A1P61619 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.26□□□□□ -0.29
SEC61A1P61619 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 MIR4313-201ENST00000580760 101 ntBASIC13.26□□□□□ -0.29
SEC61A1P61619 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 AL662799.1-202ENST00000614205 422 ntBASIC13.26□□□□□ -0.29
SEC61A1P61619 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 AC099521.3-201ENST00000624251 2938 ntBASIC13.26□□□□□ -0.29
SEC61A1P61619 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SEC61A1P61619 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61A1P61619 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 AC027612.1-201ENST00000445234 2395 ntBASIC13.25□□□□□ -0.29
SEC61A1P61619 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.25□□□□□ -0.29
SEC61A1P61619 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SEC61A1P61619 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
SEC61A1P61619 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
SEC61A1P61619 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.25□□□□□ -0.29
SEC61A1P61619 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms