Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC00315P59091 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
LINC00315P59091 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00315P59091 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
LINC00315P59091 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00315P59091 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00315P59091 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00315P59091 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00315P59091 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00315P59091 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00315P59091 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00315P59091 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00315P59091 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00315P59091 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
LINC00315P59091 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 BTBD7P1-201ENST00000447253 1453 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 COPE-202ENST00000349893 948 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 CALY-202ENST00000368555 783 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00315P59091 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00315P59091 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00315P59091 AC005225.4-201ENST00000557330 545 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 AL132655.2-201ENST00000596276 594 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 CECR7-204ENST00000609932 568 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 RNA5-8SN1-201ENST00000610460 153 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 RNA5-8SN5-202ENST00000612463 153 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 RNA5-8SN4-201ENST00000613359 153 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 RNA5-8SN5-201ENST00000619471 153 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 AL035252.4-201ENST00000624174 288 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 AC004461.2-201ENST00000629517 803 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 AC004840.1-201ENST00000636359 365 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LINC00315P59091 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00315P59091 KRT8P14-201ENST00000414254 1442 ntBASIC10.83□□□□□ -0.68
LINC00315P59091 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00315P59091 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00315P59091 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC00315P59091 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.82□□□□□ -0.68
LINC00315P59091 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00315P59091 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC00315P59091 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC00315P59091 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00315P59091 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LINC00315P59091 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LINC00315P59091 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00315P59091 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms