Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN20P56880 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CLDN20P56880 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CLDN20P56880 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN20P56880 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN20P56880 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN20P56880 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CLDN20P56880 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CLDN20P56880 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 MYO15B-237ENST00000642007 4893 ntBASIC13.83□□□□□ -0.2
CLDN20P56880 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 SBF1P1-201ENST00000444527 5631 ntBASIC13.83□□□□□ -0.2
CLDN20P56880 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLDN20P56880 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN20P56880 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CLDN20P56880 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN20P56880 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 AC068587.3-201ENST00000526613 355 ntBASIC13.83□□□□□ -0.2
CLDN20P56880 SLC25A47P1-201ENST00000531577 414 ntBASIC13.83□□□□□ -0.2
CLDN20P56880 PTP4A1P2-201ENST00000546033 454 ntBASIC13.83□□□□□ -0.2
CLDN20P56880 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN20P56880 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN20P56880 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN20P56880 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN20P56880 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN20P56880 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN20P56880 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.83□□□□□ -0.2
CLDN20P56880 BX539320.1-201ENST00000623759 877 ntBASIC13.83□□□□□ -0.2
CLDN20P56880 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN20P56880 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
CLDN20P56880 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 AC007787.1-201ENST00000588095 1583 ntBASIC13.83□□□□□ -0.2
CLDN20P56880 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN20P56880 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 MBLAC2-202ENST00000514906 1936 ntBASIC13.82□□□□□ -0.2
CLDN20P56880 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN20P56880 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDN20P56880 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CLDN20P56880 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.82□□□□□ -0.2
CLDN20P56880 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
CLDN20P56880 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN20P56880 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN20P56880 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN20P56880 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDN20P56880 AC004066.1-201ENST00000502488 802 ntBASIC13.82□□□□□ -0.2
CLDN20P56880 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms