Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 AC092135.3-201ENST00000624151 1846 ntBASIC18.28■□□□□ 0.52
PDE1AP54750 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PDE1AP54750 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 AC009093.2-202ENST00000620513 2079 ntBASIC18.27■□□□□ 0.52
PDE1AP54750 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE1AP54750 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.27■□□□□ 0.52
PDE1AP54750 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PDE1AP54750 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PDE1AP54750 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE1AP54750 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 AL590640.2-201ENST00000457038 527 ntBASIC18.27■□□□□ 0.52
PDE1AP54750 FTH1P14-201ENST00000482930 551 ntBASIC18.27■□□□□ 0.52
PDE1AP54750 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.27■□□□□ 0.52
PDE1AP54750 FTLP10-202ENST00000505798 471 ntBASIC18.27■□□□□ 0.52
PDE1AP54750 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.27■□□□□ 0.52
PDE1AP54750 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 ECM1P1-201ENST00000604092 1279 ntBASIC18.27■□□□□ 0.52
PDE1AP54750 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE1AP54750 AC244669.2-201ENST00000612320 853 ntBASIC18.27■□□□□ 0.52
PDE1AP54750 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE1AP54750 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE1AP54750 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE1AP54750 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE1AP54750 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE1AP54750 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE1AP54750 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PDE1AP54750 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PDE1AP54750 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE1AP54750 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE1AP54750 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE1AP54750 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDE1AP54750 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PDE1AP54750 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 AP000593.2-201ENST00000542775 1433 ntBASIC18.26■□□□□ 0.51
PDE1AP54750 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE1AP54750 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PDE1AP54750 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PDE1AP54750 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PDE1AP54750 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 AC106820.3-201ENST00000561653 397 ntBASIC18.26■□□□□ 0.51
PDE1AP54750 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDE1AP54750 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE1AP54750 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.26■□□□□ 0.51
PDE1AP54750 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE1AP54750 AL022328.1-201ENST00000610050 478 ntBASIC18.26■□□□□ 0.51
PDE1AP54750 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDE1AP54750 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 AL136172.1-201ENST00000598590 1394 ntBASIC18.26■□□□□ 0.51
PDE1AP54750 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE1AP54750 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE1AP54750 MRPL37P1-201ENST00000592451 1337 ntBASIC18.25■□□□□ 0.51
PDE1AP54750 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
PDE1AP54750 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE1AP54750 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.25■□□□□ 0.51
PDE1AP54750 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.25■□□□□ 0.51
PDE1AP54750 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms