Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CLCN4P51793 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.69■□□□□ 0.1
CLCN4P51793 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.69■□□□□ 0.1
CLCN4P51793 ALG3P1-201ENST00000508806 1114 ntBASIC15.69■□□□□ 0.1
CLCN4P51793 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CLCN4P51793 IQSEC3P1-201ENST00000538799 536 ntBASIC15.69■□□□□ 0.1
CLCN4P51793 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CLCN4P51793 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 RN7SL555P-201ENST00000584742 339 ntBASIC15.69■□□□□ 0.1
CLCN4P51793 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLCN4P51793 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLCN4P51793 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.69■□□□□ 0.1
CLCN4P51793 MIR6720-201ENST00000611664 98 ntBASIC15.69■□□□□ 0.1
CLCN4P51793 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLCN4P51793 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 AC136759.1-202ENST00000530858 2194 ntBASIC15.69■□□□□ 0.1
CLCN4P51793 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLCN4P51793 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.69■□□□□ 0.1
CLCN4P51793 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CLCN4P51793 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCN4P51793 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CLCN4P51793 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCN4P51793 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 LILRP1-201ENST00000444199 1370 ntBASIC15.68■□□□□ 0.1
CLCN4P51793 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 AC026316.1-201ENST00000398900 414 ntBASIC15.68■□□□□ 0.1
CLCN4P51793 TLE1P1-201ENST00000422965 589 ntBASIC15.68■□□□□ 0.1
CLCN4P51793 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.68■□□□□ 0.1
CLCN4P51793 FGFR3P1-201ENST00000449999 601 ntBASIC15.68■□□□□ 0.1
CLCN4P51793 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.68■□□□□ 0.1
CLCN4P51793 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.68■□□□□ 0.1
CLCN4P51793 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 AC073352.2-201ENST00000609385 439 ntBASIC15.68■□□□□ 0.1
CLCN4P51793 AC103691.2-201ENST00000618824 433 ntBASIC15.68■□□□□ 0.1
CLCN4P51793 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCN4P51793 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.68■□□□□ 0.1
CLCN4P51793 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 AC136621.1-201ENST00000624017 2304 ntBASIC15.68■□□□□ 0.1
CLCN4P51793 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLCN4P51793 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCN4P51793 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLCN4P51793 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN4P51793 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN4P51793 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCN4P51793 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN4P51793 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN4P51793 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms