Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TUBP50607 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TUBP50607 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 AC245100.3-201ENST00000441281 285 ntBASIC15.87■□□□□ 0.13
TUBP50607 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.87■□□□□ 0.13
TUBP50607 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.87■□□□□ 0.13
TUBP50607 MIR6799-201ENST00000620297 69 ntBASIC15.87■□□□□ 0.13
TUBP50607 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TUBP50607 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TUBP50607 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.87■□□□□ 0.13
TUBP50607 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TUBP50607 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBP50607 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TUBP50607 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.86■□□□□ 0.13
TUBP50607 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 AC012508.2-201ENST00000567613 1472 ntBASIC15.86■□□□□ 0.13
TUBP50607 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.86■□□□□ 0.13
TUBP50607 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.86■□□□□ 0.13
TUBP50607 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TUBP50607 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TUBP50607 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.86■□□□□ 0.13
TUBP50607 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TUBP50607 AL590640.2-201ENST00000457038 527 ntBASIC15.86■□□□□ 0.13
TUBP50607 AC092658.1-201ENST00000505836 891 ntBASIC15.86■□□□□ 0.13
TUBP50607 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.86■□□□□ 0.13
TUBP50607 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.86■□□□□ 0.13
TUBP50607 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.86■□□□□ 0.13
TUBP50607 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.86■□□□□ 0.13
TUBP50607 AC010328.2-201ENST00000597698 1111 ntBASIC15.86■□□□□ 0.13
TUBP50607 ECM1P1-201ENST00000604092 1279 ntBASIC15.86■□□□□ 0.13
TUBP50607 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.86■□□□□ 0.13
TUBP50607 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 AC107918.4-201ENST00000641966 3141 ntBASIC15.86■□□□□ 0.13
TUBP50607 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TUBP50607 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.86■□□□□ 0.13
TUBP50607 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.86■□□□□ 0.13
TUBP50607 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TUBP50607 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TUBP50607 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.85■□□□□ 0.13
TUBP50607 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.85■□□□□ 0.13
TUBP50607 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.85■□□□□ 0.13
TUBP50607 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.85■□□□□ 0.13
TUBP50607 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TUBP50607 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TUBP50607 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TUBP50607 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TUBP50607 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms