Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
IDH3AP50213 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.65□□□□□ -0.06
IDH3AP50213 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
IDH3AP50213 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.65□□□□□ -0.06
IDH3AP50213 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IDH3AP50213 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
IDH3AP50213 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
IDH3AP50213 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
IDH3AP50213 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.64□□□□□ -0.07
IDH3AP50213 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.64□□□□□ -0.07
IDH3AP50213 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.64□□□□□ -0.07
IDH3AP50213 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
IDH3AP50213 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
IDH3AP50213 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
IDH3AP50213 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.64□□□□□ -0.07
IDH3AP50213 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.64□□□□□ -0.07
IDH3AP50213 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 PGAM5P1-201ENST00000518923 814 ntBASIC14.64□□□□□ -0.07
IDH3AP50213 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.64□□□□□ -0.07
IDH3AP50213 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
IDH3AP50213 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.64□□□□□ -0.07
IDH3AP50213 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.64□□□□□ -0.07
IDH3AP50213 AL512361.1-201ENST00000554200 418 ntBASIC14.64□□□□□ -0.07
IDH3AP50213 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.64□□□□□ -0.07
IDH3AP50213 MTDHP5-201ENST00000598980 586 ntBASIC14.64□□□□□ -0.07
IDH3AP50213 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.64□□□□□ -0.07
IDH3AP50213 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.64□□□□□ -0.07
IDH3AP50213 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 TCAM1P-207ENST00000485295 1537 ntBASIC14.64□□□□□ -0.07
IDH3AP50213 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IDH3AP50213 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.64□□□□□ -0.07
IDH3AP50213 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
IDH3AP50213 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IDH3AP50213 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
IDH3AP50213 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
IDH3AP50213 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 COL6A4P2-202ENST00000504443 2753 ntBASIC14.63□□□□□ -0.07
IDH3AP50213 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.63□□□□□ -0.07
IDH3AP50213 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 AC023794.5-201ENST00000564380 2157 ntBASIC14.63□□□□□ -0.07
IDH3AP50213 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.63□□□□□ -0.07
IDH3AP50213 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.63□□□□□ -0.07
IDH3AP50213 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
IDH3AP50213 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
IDH3AP50213 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.63□□□□□ -0.07
IDH3AP50213 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 FDX1P1-201ENST00000449115 551 ntBASIC14.63□□□□□ -0.07
IDH3AP50213 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.63□□□□□ -0.07
IDH3AP50213 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 GAPDHP40-201ENST00000505218 1006 ntBASIC14.63□□□□□ -0.07
IDH3AP50213 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.63□□□□□ -0.07
IDH3AP50213 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
IDH3AP50213 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.63□□□□□ -0.07
IDH3AP50213 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
IDH3AP50213 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
IDH3AP50213 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
IDH3AP50213 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.63□□□□□ -0.07
IDH3AP50213 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IDH3AP50213 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms