Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 KRT18P36-201ENST00000411618 1276 ntBASIC18.77■□□□□ 0.6
COL15A1P39059 RPS9P1-201ENST00000419943 583 ntBASIC18.77■□□□□ 0.6
COL15A1P39059 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.77■□□□□ 0.6
COL15A1P39059 AC008723.1-201ENST00000506922 207 ntBASIC18.77■□□□□ 0.6
COL15A1P39059 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL15A1P39059 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.77■□□□□ 0.6
COL15A1P39059 PHBP15-201ENST00000574228 665 ntBASIC18.77■□□□□ 0.6
COL15A1P39059 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.77■□□□□ 0.6
COL15A1P39059 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.77■□□□□ 0.6
COL15A1P39059 MIR6842-201ENST00000612539 65 ntBASIC18.77■□□□□ 0.6
COL15A1P39059 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL15A1P39059 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
COL15A1P39059 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL15A1P39059 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
COL15A1P39059 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL15A1P39059 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.77■□□□□ 0.59
COL15A1P39059 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.76■□□□□ 0.59
COL15A1P39059 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.76■□□□□ 0.59
COL15A1P39059 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.76■□□□□ 0.59
COL15A1P39059 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.76■□□□□ 0.59
COL15A1P39059 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
COL15A1P39059 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.76■□□□□ 0.59
COL15A1P39059 AP000356.3-201ENST00000382243 753 ntBASIC18.76■□□□□ 0.59
COL15A1P39059 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL15A1P39059 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COL15A1P39059 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.76■□□□□ 0.59
COL15A1P39059 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.76■□□□□ 0.59
COL15A1P39059 AC114501.1-201ENST00000445949 172 ntBASIC18.76■□□□□ 0.59
COL15A1P39059 NDUFS6P1-201ENST00000485187 316 ntBASIC18.76■□□□□ 0.59
COL15A1P39059 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.76■□□□□ 0.59
COL15A1P39059 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.76■□□□□ 0.59
COL15A1P39059 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 AC018629.1-201ENST00000623381 1736 ntBASIC18.76■□□□□ 0.59
COL15A1P39059 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.76■□□□□ 0.59
COL15A1P39059 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COL15A1P39059 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL15A1P39059 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COL15A1P39059 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
COL15A1P39059 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 AC015909.3-201ENST00000572855 1794 ntBASIC18.75■□□□□ 0.59
COL15A1P39059 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 AL627389.1-201ENST00000413508 1182 ntBASIC18.75■□□□□ 0.59
COL15A1P39059 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.75■□□□□ 0.59
COL15A1P39059 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.75■□□□□ 0.59
COL15A1P39059 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 AP002803.1-201ENST00000528836 498 ntBASIC18.75■□□□□ 0.59
COL15A1P39059 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.75■□□□□ 0.59
COL15A1P39059 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 AC104640.1-201ENST00000562617 2109 ntBASIC18.75■□□□□ 0.59
COL15A1P39059 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.75■□□□□ 0.59
COL15A1P39059 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.75■□□□□ 0.59
COL15A1P39059 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
COL15A1P39059 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
COL15A1P39059 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.75■□□□□ 0.59
COL15A1P39059 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.75■□□□□ 0.59
COL15A1P39059 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL15A1P39059 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL15A1P39059 AC013726.1-201ENST00000563747 2285 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 AC144831.1-201ENST00000573312 2656 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.74■□□□□ 0.59
COL15A1P39059 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COL15A1P39059 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms