Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 BCRP4-201ENST00000506079 804 ntBASIC20.58■□□□□ 0.89
CPS1P31327 GOLGA2P7-209ENST00000560408 745 ntBASIC20.58■□□□□ 0.89
CPS1P31327 AC142086.5-202ENST00000562500 217 ntBASIC20.58■□□□□ 0.89
CPS1P31327 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC20.58■□□□□ 0.89
CPS1P31327 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC20.58■□□□□ 0.89
CPS1P31327 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CPS1P31327 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.58■□□□□ 0.89
CPS1P31327 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPS1P31327 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.58■□□□□ 0.89
CPS1P31327 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPS1P31327 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.58■□□□□ 0.89
CPS1P31327 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CPS1P31327 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPS1P31327 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.58■□□□□ 0.88
CPS1P31327 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CPS1P31327 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.58■□□□□ 0.88
CPS1P31327 CASP3-205ENST00000517513 964 ntTSL 5 BASIC20.58■□□□□ 0.88
CPS1P31327 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC20.58■□□□□ 0.88
CPS1P31327 KNOP1P1-201ENST00000542108 989 ntBASIC20.58■□□□□ 0.88
CPS1P31327 AC003686.1-201ENST00000550956 1034 ntBASIC20.58■□□□□ 0.88
CPS1P31327 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC20.58■□□□□ 0.88
CPS1P31327 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC20.58■□□□□ 0.88
CPS1P31327 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC20.58■□□□□ 0.88
CPS1P31327 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.58■□□□□ 0.88
CPS1P31327 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPS1P31327 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.58■□□□□ 0.88
CPS1P31327 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CPS1P31327 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.57■□□□□ 0.88
CPS1P31327 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.57■□□□□ 0.88
CPS1P31327 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC20.57■□□□□ 0.88
CPS1P31327 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CPS1P31327 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20.57■□□□□ 0.88
CPS1P31327 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 RPL14-203ENST00000416518 812 ntTSL 3 BASIC20.57■□□□□ 0.88
CPS1P31327 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 IGKV1OR-2-201ENST00000457995 350 ntBASIC20.57■□□□□ 0.88
CPS1P31327 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC20.57■□□□□ 0.88
CPS1P31327 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.57■□□□□ 0.88
CPS1P31327 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.57■□□□□ 0.88
CPS1P31327 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC20.57■□□□□ 0.88
CPS1P31327 FBXO36P1-201ENST00000579006 471 ntBASIC20.57■□□□□ 0.88
CPS1P31327 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC20.57■□□□□ 0.88
CPS1P31327 AP000769.1-203ENST00000637245 208 ntBASIC20.57■□□□□ 0.88
CPS1P31327 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.57■□□□□ 0.88
CPS1P31327 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPS1P31327 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CPS1P31327 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPS1P31327 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
CPS1P31327 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CPS1P31327 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CPS1P31327 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CPS1P31327 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC20.56■□□□□ 0.88
CPS1P31327 HNRNPA1P27-201ENST00000412087 955 ntBASIC20.56■□□□□ 0.88
CPS1P31327 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.56■□□□□ 0.88
CPS1P31327 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC20.56■□□□□ 0.88
CPS1P31327 RNA5SP406-201ENST00000516106 112 ntBASIC20.56■□□□□ 0.88
CPS1P31327 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPS1P31327 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC20.56■□□□□ 0.88
CPS1P31327 AC013553.1-201ENST00000560906 267 ntBASIC20.56■□□□□ 0.88
CPS1P31327 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC20.56■□□□□ 0.88
CPS1P31327 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.56■□□□□ 0.88
CPS1P31327 PHF23-213ENST00000613632 850 ntTSL 5 BASIC20.56■□□□□ 0.88
CPS1P31327 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CPS1P31327 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.56■□□□□ 0.88
CPS1P31327 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPS1P31327 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.56■□□□□ 0.88
CPS1P31327 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.56■□□□□ 0.88
CPS1P31327 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CPS1P31327 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 PCDHA1-201ENST00000378133 2726 ntBASIC20.55■□□□□ 0.88
CPS1P31327 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CPS1P31327 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.55■□□□□ 0.88
CPS1P31327 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC20.55■□□□□ 0.88
CPS1P31327 AC053503.3-201ENST00000448375 114 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms