Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.51■□□□□ 0.23
CTGFP29279 AL357373.1-201ENST00000394974 322 ntBASIC16.51■□□□□ 0.23
CTGFP29279 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.51■□□□□ 0.23
CTGFP29279 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.51■□□□□ 0.23
CTGFP29279 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 AC018638.5-201ENST00000450885 754 ntBASIC16.51■□□□□ 0.23
CTGFP29279 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CTGFP29279 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 RNA5SP406-201ENST00000516106 112 ntBASIC16.51■□□□□ 0.23
CTGFP29279 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.51■□□□□ 0.23
CTGFP29279 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.51■□□□□ 0.23
CTGFP29279 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.51■□□□□ 0.23
CTGFP29279 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 BRD7P5-201ENST00000299197 1822 ntBASIC16.51■□□□□ 0.23
CTGFP29279 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTGFP29279 AC009093.10-201ENST00000641956 1442 ntBASIC16.51■□□□□ 0.23
CTGFP29279 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CTGFP29279 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTGFP29279 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CTGFP29279 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CTGFP29279 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CTGFP29279 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CTGFP29279 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 CTBP2P8-201ENST00000422584 1330 ntBASIC16.5■□□□□ 0.23
CTGFP29279 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.5■□□□□ 0.23
CTGFP29279 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CTGFP29279 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 PYY2-201ENST00000315776 282 ntBASIC16.5■□□□□ 0.23
CTGFP29279 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CTGFP29279 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.5■□□□□ 0.23
CTGFP29279 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CTGFP29279 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CTGFP29279 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.5■□□□□ 0.23
CTGFP29279 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.5■□□□□ 0.23
CTGFP29279 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.5■□□□□ 0.23
CTGFP29279 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.5■□□□□ 0.23
CTGFP29279 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.5■□□□□ 0.23
CTGFP29279 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CTGFP29279 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.5■□□□□ 0.23
CTGFP29279 ABHD17AP9-201ENST00000561925 548 ntBASIC16.5■□□□□ 0.23
CTGFP29279 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.5■□□□□ 0.23
CTGFP29279 AC010632.2-201ENST00000588369 1224 ntBASIC16.5■□□□□ 0.23
CTGFP29279 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.5■□□□□ 0.23
CTGFP29279 MME-218ENST00000625667 363 ntTSL 5 BASIC16.5■□□□□ 0.23
CTGFP29279 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.5■□□□□ 0.23
CTGFP29279 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
CTGFP29279 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 AC006504.5-208ENST00000588784 2401 ntBASIC16.5■□□□□ 0.23
CTGFP29279 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.5■□□□□ 0.23
CTGFP29279 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
CTGFP29279 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CTGFP29279 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CTGFP29279 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.5■□□□□ 0.23
CTGFP29279 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.5■□□□□ 0.23
CTGFP29279 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTGFP29279 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.49■□□□□ 0.23
CTGFP29279 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 AC023024.2-201ENST00000623561 1993 ntBASIC16.49■□□□□ 0.23
CTGFP29279 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.49■□□□□ 0.23
CTGFP29279 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms