Protein–RNA interactions for Protein: P28562

DUSP1, Dual specificity protein phosphatase 1, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP1P28562 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
DUSP1P28562 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.91□□□□□ -0.34
DUSP1P28562 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
DUSP1P28562 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.91□□□□□ -0.34
DUSP1P28562 PMS2P2-201ENST00000425039 1128 ntBASIC12.91□□□□□ -0.34
DUSP1P28562 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.91□□□□□ -0.34
DUSP1P28562 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
DUSP1P28562 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 AC036164.1-201ENST00000570544 333 ntBASIC12.91□□□□□ -0.34
DUSP1P28562 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.91□□□□□ -0.34
DUSP1P28562 AL391069.4-201ENST00000609583 481 ntBASIC12.91□□□□□ -0.34
DUSP1P28562 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.91□□□□□ -0.34
DUSP1P28562 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
DUSP1P28562 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.91□□□□□ -0.34
DUSP1P28562 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DUSP1P28562 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.91□□□□□ -0.34
DUSP1P28562 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DUSP1P28562 AC041040.2-201ENST00000622926 2899 ntBASIC12.91□□□□□ -0.34
DUSP1P28562 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.91□□□□□ -0.34
DUSP1P28562 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.91□□□□□ -0.34
DUSP1P28562 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.9□□□□□ -0.34
DUSP1P28562 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.9□□□□□ -0.34
DUSP1P28562 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.9□□□□□ -0.34
DUSP1P28562 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 AC104457.1-201ENST00000401024 814 ntBASIC12.9□□□□□ -0.34
DUSP1P28562 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.9□□□□□ -0.34
DUSP1P28562 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.9□□□□□ -0.34
DUSP1P28562 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.9□□□□□ -0.34
DUSP1P28562 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.9□□□□□ -0.34
DUSP1P28562 RN7SL399P-201ENST00000471648 279 ntBASIC12.9□□□□□ -0.34
DUSP1P28562 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
DUSP1P28562 AC004066.1-201ENST00000502488 802 ntBASIC12.9□□□□□ -0.34
DUSP1P28562 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.9□□□□□ -0.34
DUSP1P28562 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.9□□□□□ -0.34
DUSP1P28562 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 LILRP1-201ENST00000444199 1370 ntBASIC12.9□□□□□ -0.34
DUSP1P28562 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.9□□□□□ -0.34
DUSP1P28562 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.9□□□□□ -0.34
DUSP1P28562 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
DUSP1P28562 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 LINC01230-201ENST00000625222 3017 ntBASIC12.9□□□□□ -0.34
DUSP1P28562 AC006504.5-208ENST00000588784 2401 ntBASIC12.9□□□□□ -0.34
DUSP1P28562 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DUSP1P28562 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms