Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AP001063.1-201ENST00000568332 529 ntBASIC12.64□□□□□ -0.39
LMO1P25800 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LMO1P25800 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.64□□□□□ -0.39
LMO1P25800 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.64□□□□□ -0.39
LMO1P25800 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LMO1P25800 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
LMO1P25800 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.64□□□□□ -0.39
LMO1P25800 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LMO1P25800 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LMO1P25800 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.64□□□□□ -0.39
LMO1P25800 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LMO1P25800 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 LINC01230-201ENST00000625222 3017 ntBASIC12.63□□□□□ -0.39
LMO1P25800 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.63□□□□□ -0.39
LMO1P25800 AL162726.2-201ENST00000438986 1017 ntBASIC12.63□□□□□ -0.39
LMO1P25800 AC002472.2-201ENST00000442739 958 ntBASIC12.63□□□□□ -0.39
LMO1P25800 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.63□□□□□ -0.39
LMO1P25800 TERF1P3-201ENST00000505638 1227 ntBASIC12.63□□□□□ -0.39
LMO1P25800 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.63□□□□□ -0.39
LMO1P25800 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 AC005252.2-201ENST00000624630 1141 ntBASIC12.63□□□□□ -0.39
LMO1P25800 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LMO1P25800 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LMO1P25800 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LMO1P25800 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LMO1P25800 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LMO1P25800 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO1P25800 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 AL359881.3-201ENST00000602640 1721 ntBASIC12.62□□□□□ -0.39
LMO1P25800 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 PCDHA3-202ENST00000532566 4594 ntBASIC12.62□□□□□ -0.39
LMO1P25800 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.62□□□□□ -0.39
LMO1P25800 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms