Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.24□□□□□ -0.29
RAB3BP20337 AC004870.1-201ENST00000315132 882 ntBASIC13.24□□□□□ -0.29
RAB3BP20337 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 AC074338.1-201ENST00000416825 156 ntBASIC13.24□□□□□ -0.29
RAB3BP20337 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 KRT8P48-201ENST00000515599 1220 ntBASIC13.24□□□□□ -0.29
RAB3BP20337 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
RAB3BP20337 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RAB3BP20337 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
RAB3BP20337 AC092865.6-201ENST00000642101 219 ntBASIC13.24□□□□□ -0.29
RAB3BP20337 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
RAB3BP20337 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB3BP20337 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB3BP20337 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB3BP20337 AC090505.1-201ENST00000430515 1834 ntBASIC13.23□□□□□ -0.29
RAB3BP20337 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RAB3BP20337 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 FAM58CP-201ENST00000435741 640 ntBASIC13.23□□□□□ -0.29
RAB3BP20337 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB3BP20337 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 BANF1P1-201ENST00000553684 263 ntBASIC13.23□□□□□ -0.29
RAB3BP20337 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
RAB3BP20337 SAMD11P1-201ENST00000571429 661 ntBASIC13.23□□□□□ -0.29
RAB3BP20337 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB3BP20337 AC084121.4-201ENST00000641598 221 ntBASIC13.23□□□□□ -0.29
RAB3BP20337 AF228730.8-201ENST00000642140 221 ntBASIC13.23□□□□□ -0.29
RAB3BP20337 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAB3BP20337 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB3BP20337 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB3BP20337 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB3BP20337 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAB3BP20337 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB3BP20337 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB3BP20337 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB3BP20337 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB3BP20337 KRT8P12-202ENST00000472924 1397 ntBASIC13.22□□□□□ -0.29
RAB3BP20337 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAB3BP20337 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms