Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.28□□□□□ -0.12
SCN2BO60939 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.28□□□□□ -0.12
SCN2BO60939 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.28□□□□□ -0.12
SCN2BO60939 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 DOC2GP-202ENST00000514950 1163 ntBASIC14.28□□□□□ -0.12
SCN2BO60939 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SCN2BO60939 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.28□□□□□ -0.12
SCN2BO60939 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.28□□□□□ -0.12
SCN2BO60939 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SCN2BO60939 AC006504.5-208ENST00000588784 2401 ntBASIC14.28□□□□□ -0.12
SCN2BO60939 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.28□□□□□ -0.12
SCN2BO60939 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SCN2BO60939 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SCN2BO60939 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.28□□□□□ -0.12
SCN2BO60939 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.28□□□□□ -0.12
SCN2BO60939 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.28□□□□□ -0.12
SCN2BO60939 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SCN2BO60939 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN2BO60939 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SCN2BO60939 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN2BO60939 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.27□□□□□ -0.12
SCN2BO60939 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN2BO60939 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.27□□□□□ -0.12
SCN2BO60939 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN2BO60939 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN2BO60939 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN2BO60939 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN2BO60939 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.27□□□□□ -0.12
SCN2BO60939 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN2BO60939 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN2BO60939 AC015656.1-201ENST00000624209 3578 ntBASIC14.27□□□□□ -0.12
SCN2BO60939 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SCN2BO60939 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN2BO60939 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
SCN2BO60939 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCN2BO60939 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCN2BO60939 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.27□□□□□ -0.12
SCN2BO60939 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCN2BO60939 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SCN2BO60939 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN2BO60939 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SCN2BO60939 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN2BO60939 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SCN2BO60939 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 NUS1P3-201ENST00000423502 862 ntBASIC14.27□□□□□ -0.13
SCN2BO60939 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.27□□□□□ -0.13
SCN2BO60939 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.27□□□□□ -0.13
SCN2BO60939 TPRX2P-201ENST00000535362 881 ntBASIC14.27□□□□□ -0.13
SCN2BO60939 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN2BO60939 RRP7BP-205ENST00000566851 833 ntBASIC14.27□□□□□ -0.13
SCN2BO60939 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.27□□□□□ -0.13
SCN2BO60939 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN2BO60939 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN2BO60939 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SCN2BO60939 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN2BO60939 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN2BO60939 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.27□□□□□ -0.13
SCN2BO60939 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
SCN2BO60939 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN2BO60939 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SCN2BO60939 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms